| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 3,734,269 | 0 | T | G | 45.0% | 184.2 / 59.4 | 160 | V402G (GTG→GGG) | avtA | valine‑‑pyruvate transaminase |
| Reads supporting (aligned to +/- strand): ref base T (18/70); new base G (72/0); total (90/70) | |||||||||||
| Fisher's exact test for biased strand distribution p-value = 9.35e-29 | |||||||||||
| Kolmogorov-Smirnov test that lower quality scores support variant p-value = 1.00e+00 | |||||||||||
| Rejected as consensus: Frequency below/above cutoff threshold. | |||||||||||
Only 100 of 171 total aligned reads displayed.
CCAGGGCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATT > NZ_CP009273/3734184‑3734358 | ccAGGGCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAg < 1:3158386/90‑1 (MQ=255)ccAGGGCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAg > 1:321280/1‑90 (MQ=255) aGGGCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAAAt > 1:81391/1‑90 (MQ=255) gggCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGAtt > 2:3201369/1‑90 (MQ=255) gggCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGAtt > 1:2301762/1‑90 (MQ=255) ggATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGGAGATTCTGGc > 1:2105572/1‑90 (MQ=255) tAAACCGTGGCCGCATACGCATCAATGTATGCGTATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGa < 1:3058598/90‑1 (MQ=255) tAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGa < 2:3066923/90‑1 (MQ=255) tAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGa < 2:1507109/90‑1 (MQ=255) tAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGa < 2:1506283/90‑1 (MQ=255) aaCCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAag < 2:2304002/90‑1 (MQ=255) aaCCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAag < 1:2295013/90‑1 (MQ=255) aaCCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAag < 2:2105572/90‑1 (MQ=255) aaCCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTTGCGGGag > 1:887193/1‑90 (MQ=255) aaCCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAag > 2:208509/1‑90 (MQ=255) ccGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGAATCTGGCGGGagag > 2:518736/1‑90 (MQ=255) tGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGGAGATTCTGGCGGGAGAGATa > 2:3156808/1‑90 (MQ=255) tGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGGAGATTCTGGCGGAAgagaaa > 2:159280/1‑88 (MQ=255) tGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATa > 1:1256010/1‑90 (MQ=255) tGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAAATTCTGGGGGAAGAGATa > 1:97363/1‑90 (MQ=255) aTACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAagag > 1:3169317/1‑90 (MQ=255) gCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTg < 2:2351711/90‑1 (MQ=255) tCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGc < 2:161950/90‑1 (MQ=255) aTGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTTTGGCGGAAGAGATAG‑AAAGAGCCTGGGGTGa > 2:714124/1‑90 (MQ=255) tATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGGTGAAAg > 1:227944/1‑90 (MQ=255) tATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAg > 1:2660460/1‑90 (MQ=255) aTGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTTTGGCGGAAGAGAAAG‑AAAAAGCCTGGGGTGGAAgg > 2:105546/1‑89 (MQ=255) aTGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAAAGCCTGGGCTGAAAGt > 1:2803981/1‑90 (MQ=255) tGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTTTGGCGGGAGAGATAG‑AAAAAGCCTGGGCTGAAAGTc > 1:1768223/1‑90 (MQ=255) tGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTTGCGGAAGAGAt > 1:1061702/1‑67 (MQ=255) tGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGGGGGAGAGATAG‑AAAGAGCCTGGGCTGAAAggc > 2:264049/1‑88 (MQ=255) tGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGGTAG‑AAAGAGCCTTGGCTGAAAATc > 1:952409/1‑90 (MQ=255) tGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGGAAGTc > 1:1946260/1‑90 (MQ=255) gcATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACt < 2:2625480/90‑1 (MQ=255) gcATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACt < 2:293492/90‑1 (MQ=255) aTGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTaa > 1:612763/1‑90 (MQ=255) aTGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTTTGGCGGGAGAGAAAG‑AAAAAGCCTGGGGTGAAAGGCACTaa > 2:2825765/1‑90 (MQ=255) aTGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTaa > 1:270566/1‑90 (MQ=255) gAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGGAGAATCTTGCGGAAGAAAAAGAAAAAACCCTGGGTGGAAAG‑CACTaaaa > 2:2935645/1‑90 (MQ=255) gAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGGCACTaaaa > 1:1556604/1‑90 (MQ=255) aCTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGGAGAGATAG‑AAAAAGCCCGGGGTGAAAGGCACTAAAAAt > 2:778274/1‑90 (MQ=255) tACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTg < 2:574760/90‑1 (MQ=255) aCGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGc > 1:1149546/1‑90 (MQ=255) aCGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGc > 1:1704354/1‑90 (MQ=255) aCGTACCAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGGAAG‑AAAAAGCCTGGGGTGAAAGTCACTAAAAATTGc > 2:2931752/1‑90 (MQ=255) cGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGcc < 1:296684/90‑1 (MQ=255) aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGa < 2:3127593/90‑1 (MQ=255) aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGa < 2:1079843/90‑1 (MQ=255) aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGa < 2:3216654/90‑1 (MQ=255) aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGa < 2:363052/90‑1 (MQ=255) aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGa < 1:396737/90‑1 (MQ=255) aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGa < 2:251980/90‑1 (MQ=255) aCCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGa < 1:159280/90‑1 (MQ=255) ccAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGGGATAG‑AAAAAGCCCGGGGGGAAAGGCACTAAAAAATTCCTGAt > 1:1587863/1‑90 (MQ=255) ccAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAAAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGAt > 2:833687/1‑90 (MQ=255) ccAGAGCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGAt > 1:3080718/1‑90 (MQ=255) cAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATg < 1:937776/90‑1 (MQ=255) cAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATg < 1:1216016/90‑1 (MQ=255) agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgc < 1:833687/90‑1 (MQ=255) agagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgc < 2:386603/90‑1 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGTGAAGATTTTGGCGGGAGAGATAG‑AAAGAGCCTGGGGTGAAAGGCACTAAAAATTGTCTTATgcg > 1:3124825/1‑90 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGTGAAGATTCt < 1:1020551/35‑1 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGGAGAGATAG‑AAAGAGCCTGGGGTGAAAGTGGCGAAAAATTGCCTGGTgcg > 1:1155789/1‑90 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGGAGAGAAAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTTCCTGGTgcg > 2:1216016/1‑90 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGGCACTAAAAATTGCCTGATgcg > 2:3092854/1‑90 (MQ=255) gagCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGAAAG‑AAAAAGGCTGGGCTGAAAGGCACTAAAAATTGCCTGATgcg > 2:2661562/1‑90 (MQ=255) ggCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc < 1:2417784/89‑1 (MQ=255) agCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc < 1:2540391/90‑1 (MQ=255) agCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc < 2:3098652/90‑1 (MQ=255) agCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc < 2:2803394/90‑1 (MQ=255) agCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc < 2:3351859/90‑1 (MQ=255) agCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc < 2:1704354/90‑1 (MQ=255) agCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc < 2:1953422/90‑1 (MQ=255) gCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑aaa < 2:1528720/50‑1 (MQ=255) gCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATgcgc > 2:3282447/1‑89 (MQ=255) gCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCt < 2:1913469/90‑1 (MQ=255) gCCGGAGAAAATTGAGGCGGGGGGGAAGATTTTGGCGGGAAAGGTAT‑AAAGAGCCGGGGCTGAAAAAGACTTAAAATTTTCTGATgcgcc > 2:844679/1‑89 (MQ=255) gCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGTAGAGATAG‑aaa > 1:1528720/1‑50 (MQ=255) gCCGGAGAAAATTGAGGCGGGGGGGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGGGCt > 2:1362278/1‑90 (MQ=255) ggAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACg > 1:409089/1‑90 (MQ=255) ggAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACg < 2:612763/90‑1 (MQ=255) gagaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGc < 1:2724000/90‑1 (MQ=255) gagaAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGc < 2:2862310/90‑1 (MQ=255) aaTTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATc < 1:1022075/90‑1 (MQ=255) aaTTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATc < 1:339588/90‑1 (MQ=255) aaTTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATc < 1:1810889/90‑1 (MQ=255) aTTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCa < 1:3266243/90‑1 (MQ=255) tGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGACTGATGCGCTACGCTTATCAgg < 2:177951/90‑1 (MQ=255) aGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGcc < 2:1156581/90‑1 (MQ=255) ggCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCt < 2:2301762/90‑1 (MQ=255) ggCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCt < 1:2458608/90‑1 (MQ=255) gggggTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa > 1:645235/1‑90 (MQ=255) gggggTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACa > 1:3269883/1‑90 (MQ=255) ggggGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGACACTAAAAATTGCCTGATGCGCTAGGCTTATCAGGGCTTCATg > 1:45651/1‑90 (MQ=37) tGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTTGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAtt < 2:201807/90‑1 (MQ=255) tGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAtt < 2:2274491/90‑1 (MQ=255) tGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAtt < 1:714124/90‑1 (MQ=255) tGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAtt < 1:676990/90‑1 (MQ=255) tGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAtt < 1:1362278/90‑1 (MQ=255) tGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGAtt < 2:952409/90‑1 (MQ=255) | CCAGGGCTGGATAAACCGTGGCCGCATACGCATCAATGTATGCGCATGAACTACGTACCAGAGCCGGAGAAAATTGAGGCGGGGGTGAAGATTCTGGCGGAAGAGATAG‑AAAGAGCCTGGGCTGAAAGTCACTAAAAATTGCCTGATGCGCTACGCTTATCAGGCCTACATGATT > NZ_CP009273/3734184‑3734358 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 17 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |