Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3638255	3639067	813	2 [1]	[0] 2	[prlC]–[rlmJ]	[prlC],[rlmJ]

GCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGA  >  NZ_CP009273/3639068‑3639108 |                                         gCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGa  >  1:163607/1‑41 (MQ=255) gCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGa  <  2:163607/41‑1 (MQ=255) |                                         GCGTGAACAGGACAGCCTGCAACTGACCGAACTGCACCCGA  >  NZ_CP009273/3639068‑3639108

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑