Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4466660	4466682	23	3 [1]	[1] 3	BW25113_RS22080	hypothetical protein

TAATGAAGTACCTGTCAGCATTTTAGTGAATGATATTTTTATGAATGATTTCTTTATGAAAAATCCTGAGATGATTAATTGGTACTTCCC  >  NZ_CP009273/4466678‑4466767      |                                                                                     tAATGAAGTACCTGTCAGCATTTTAGTGAATGATATTTTTATGAATGATTTCTTTATGAAAAATCCTGAGATGATTAATTGGTACTTccc  >  1:53979/1‑90 (MQ=255)      aaGTACCTGTCAGCATTTTAGTGAATGATATTTTTATGAATGATTTCTTTATGAAAAATCCTGAgatgat                 >  1:224027/1‑70 (MQ=255)      aaGTACCTGTCAGCATTTTAGTGAATGATATTTTTATGAATGATTTCTTTATGAAAAATCCTGAgatgat                 <  2:224027/70‑1 (MQ=255)      |                                                                                     TAATGAAGTACCTGTCAGCATTTTAGTGAATGATATTTTTATGAATGATTTCTTTATGAAAAATCCTGAGATGATTAATTGGTACTTCCC  >  NZ_CP009273/4466678‑4466767

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑