Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3638790	3640700	1911	2 [0]	[1] 2	[rlmJ]–[gorA]	[rlmJ],[gorA]

ATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGAC  >  NZ_CP009273/3638745‑3638789                                             | aTGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGAc  <  1:84886/45‑1 (MQ=255) aTGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGAc  >  2:84886/1‑45 (MQ=255)                                             | ATGCTCAGTTATCGCCACAGCTTTCACGCTGGCAACCACGCCGAC  >  NZ_CP009273/3638745‑3638789

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑