| New junction evidence | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | reads (cov) | reads (cov) | score | skew | freq | annotation | gene | product | ||
| * | ? | NZ_CP009273 | = 4571590 | 79 (1.260) | 3 (0.050) | 3/158 | 3.9 | 3.7% | coding (1276/1590 nt) | hsdM | type I restriction‑modification system methyltransferase |
| ? | NZ_CP009273 | 4571594 = | 81 (1.330) | coding (1272/1590 nt) | hsdM | type I restriction‑modification system methyltransferase | |||||
| Rejected: Coverage evenness skew score above cutoff. | |||||||||||
| Rejected: Frequency below/above cutoff threshold. | |||||||||||
CACTCACGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCATACACGCGCTCAAACG > NZ_CP009273/4571505‑4571667 | cACTCACGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCg < 1:645186/90‑1 (MQ=255) aCTCACGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGGTGGTCGGTGGTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCgg > 1:1676884/1‑90 (MQ=255) aCTCACGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCgg > 2:1113258/1‑90 (MQ=255) tCACGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCg > 2:1301077/1‑90 (MQ=255) aCGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGtt < 2:55803/90‑1 (MQ=255) cGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTa > 2:958716/1‑90 (MQ=255) gCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTaaa < 1:1252894/90‑1 (MQ=255) gCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTaaa < 1:1750435/90‑1 (MQ=255) cTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTaaaa < 1:1113257/90‑1 (MQ=255) tGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAAc < 1:1901934/90‑1 (MQ=255) gAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGACAACTTCCGTCTCTTCGGCGTTAAAACt > 2:1016021/1‑90 (MQ=255) aaCTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTc > 1:1899133/1‑90 (MQ=255) aCTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTcc < 2:295044/90‑1 (MQ=255) ttGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAt < 1:1653524/90‑1 (MQ=255) ttGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAt < 1:1777295/90‑1 (MQ=255) tGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAtt > 2:1082600/1‑90 (MQ=255) tGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAtt > 2:617503/1‑90 (MQ=255) tGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAtt > 1:716972/1‑90 (MQ=255) tGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAtt > 2:603625/1‑90 (MQ=255) tGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAtt > 1:1693158/1‑90 (MQ=255) tGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAtt > 2:1687220/1‑90 (MQ=255) gcgcCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTc < 2:1287115/90‑1 (MQ=255) gcgcCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTc < 1:1692380/90‑1 (MQ=255) gcgcCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTc < 2:670423/90‑1 (MQ=255) gcgcCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTc < 1:422167/90‑1 (MQ=255) ccAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCAcc < 2:627868/90‑1 (MQ=255) cAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAt < 1:823464/84‑1 (MQ=255) cAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCAt > 2:823465/1‑84 (MQ=255) gCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTc > 1:1067192/1‑90 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:404217/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:1693159/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:1501214/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:216472/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:1301636/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:1082599/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:445241/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:1908608/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:53285/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:83772/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:617503/90‑1 (MQ=255) gTAGCAAGATGCTGGTCGATGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCTCCTTCAGTgcgc < 1:605309/90‑1 (MQ=255) gTAACAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:1824755/90‑1 (MQ=255) aGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCgg < 2:1163318/90‑1 (MQ=255) aaGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCt > 2:1541444/1‑90 (MQ=255) aGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTc < 2:1023925/71‑1 (MQ=255) aGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTc > 1:1023924/1‑71 (MQ=255) aGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCG‑‑TCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTaa > 1:855057/1‑90 (MQ=255) tGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc > 1:1507207/1‑81 (MQ=255) tGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:1507208/81‑1 (MQ=255) gCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:138388/80‑1 (MQ=255) gCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 2:220327/80‑1 (MQ=255) gCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc > 1:220327/1‑80 (MQ=255) gCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc > 2:138388/1‑80 (MQ=255) gCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAAc > 1:842419/1‑90 (MQ=255) gtgtTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGcgcg > 1:1472851/1‑73 (MQ=255) gtgtTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGcgcg < 2:1472852/73‑1 (MQ=255) gtgtTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTC‑‑‑TCGGCGTTAAAACTcc > 1:1454874/1‑52 (MQ=255) gtgtTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTC‑‑‑TCGGCGTTAAAACTcc < 2:1454875/52‑1 (MQ=255) gtTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTc < 2:1492719/90‑1 (MQ=255) tttGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCTCGGGCTTAAACCGTGCGGGTCTTc < 1:301698/90‑1 (MQ=255) tttGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTc > 2:1565271/1‑90 (MQ=255) tttGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTc < 1:1565270/90‑1 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:1048815/62‑1 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc > 2:1048816/1‑62 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTc > 1:519469/1‑82 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTc < 2:519469/82‑1 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCAt > 1:1864880/1‑90 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCAt > 2:817458/1‑90 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCAt < 2:716972/90‑1 (MQ=255) tctcTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCAt > 1:575084/1‑90 (MQ=255) tctTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc > 2:1197420/1‑60 (MQ=255) tctTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:1197419/60‑1 (MQ=255) tctTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTTCGGGTCTTCGCCATac > 2:1488488/1‑90 (MQ=255) ctTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:917715/59‑1 (MQ=255) ctTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc > 2:469758/1‑59 (MQ=255) ctTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc < 1:469758/59‑1 (MQ=255) ctTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTgcgc > 2:917716/1‑59 (MQ=255) ttCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCCCCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCATacac < 1:236743/90‑1 (MQ=255) ttCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCATacac < 2:1085473/90‑1 (MQ=255) ttCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCATacac < 2:250453/90‑1 (MQ=255) ttCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCATacac < 2:1899134/90‑1 (MQ=255) cAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCATACACGCGCTCAAACg < 1:581075/90‑1 (MQ=255) | CACTCACGGCTGAACTTGCGCCAGCGGCTGGTAGCAAGATGCTGGTCGGTGTTTTTGTTCTCTTCGCTGTCGGCAACTTCCGTCTCTTCGGCGTTAAAACTCCATTCACCTTCAGTGCGCGGGCTTAAACCGTGCGGGTCTTCGCCATACACGCGCTCAAACG > NZ_CP009273/4571505‑4571667 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |
| Reads not counted as support for junction |
| read_name Not counted due to insufficient overlap past the breakpoint. |
| read_name Not counted due to not crossing MOB target site duplication. |