Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1091351	1091365	15	2 [1]	[0] 2	BW25113_RS05360	hypothetical protein

CATTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGATTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGATAT  >  NZ_CP009273/1091261‑1091353                                                                                          |    cATTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGATTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGa     >  2:327805/1‑90 (MQ=255)    tGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGATTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGatat  <  1:291717/90‑1 (MQ=255)                                                                                          |    CATTGTCGTAAAGCATTTAGTGATGCAAAGGTATTCAAATGATTCCTGATTATTTAACTTTTATTCGCTTTCAGGATAAACGAAATCTGATAT  >  NZ_CP009273/1091261‑1091353

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑