Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1099391	1099401	11	2 [0]	[1] 2	csgD/csgB	biofilm master transcriptional regulator CsgD/curli minor subunit CsgB

TGCGTTAACAACCAAGTTGAAATGATTTAATTTCTTAAATGTACGACCA  >  NZ_CP009273/1099342‑1099390                                                 | tGCGTTAACAACCAAGTTGAAATGATTTAATTTCTTAAATGTACGACCa  >  1:353376/1‑49 (MQ=255) tGCGTTAACAACCAAGTTGAAATGATTTAATTTCTTAAATGTACGACCa  <  2:353376/49‑1 (MQ=255)                                                 | TGCGTTAACAACCAAGTTGAAATGATTTAATTTCTTAAATGTACGACCA  >  NZ_CP009273/1099342‑1099390

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑