Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1218655	1218706	52	2 [1]	[0] 2	BW25113_RS06100/BW25113_RS23645	hypothetical protein/hypothetical protein

TAGGAATTATGTTTTTTACGTGAATGAGAATAATCTTAAATGAGGAATAACTCATTGATTGACAATATTTTTATTCAAGAAGTGTCATTGACTGTTAACGCAA  >  NZ_CP009273/1218565‑1218667                                                                                          |              tAGGAATTATGTTTTTTACGTGAATGAGAATAATCTTAAATCAGGAATAACTCATTGATTGACAATATTTTTATTCAAGAAGTGTCATTg               >  2:76487/1‑90 (MQ=255)              ttttACGTGAATGAGAATAATCTTAAATCAGGAATAACTCATTGATTGACAATATTTTTATTCAAGAAGTGTCATTGACTGTTAACGCaa  <  1:76487/90‑1 (MQ=255)                                                                                          |              TAGGAATTATGTTTTTTACGTGAATGAGAATAATCTTAAATGAGGAATAACTCATTGATTGACAATATTTTTATTCAAGAAGTGTCATTGACTGTTAACGCAA  >  NZ_CP009273/1218565‑1218667

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑