Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1524457	1524472	16	2 [0]	[0] 5	BW25113_RS26145	hypothetical protein

CACTGTGGAGTGGTTGATATAAATCTTAATTTTTTCAA  >  NZ_CP009273/1524419‑1524456                                      | cACTGTGGAGTGGTTGATATAAATCTTAATTTTTTCaa  >  1:38221/1‑38 (MQ=255) cACTGTGGAGTGGTTGATATAAATCTTAATTTTTTCaa  <  2:38221/38‑1 (MQ=255)                                      | CACTGTGGAGTGGTTGATATAAATCTTAATTTTTTCAA  >  NZ_CP009273/1524419‑1524456

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑