Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1584175	1584195	21	5 [1]	[1] 3	ydeT	fimbria/pilus outer membrane usher protein

GTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAAC  >  NZ_CP009273/1584085‑1584184                                                                                          |           gtTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCtt            <  1:105101/90‑1 (MQ=255) gtTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCtt            <  2:3604/90‑1 (MQ=255)           cTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAAc  <  2:251794/90‑1 (MQ=255)                                      gTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCtt            <  1:118006/53‑1 (MQ=255)                                      gTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCtt            >  2:118006/1‑53 (MQ=255)                                                                                          |           GTTCCAGTAACTTTGGCGACTGGCACTGAAAAATGTCGTACCGTAATTTCCAAGCTGCTGAGAGATGCTTATTTGTTCCTGACCACGCTTACTGTAGAAC  >  NZ_CP009273/1584085‑1584184

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 23 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑