Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2779688	2779733	46	2 [0]	[0] 2	BW25113_RS13825/BW25113_RS26005	tRNA‑Ile/alpha‑amylase family glycosyl hydrolase

TTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTT  >  NZ_CP009273/2779632‑2779687                                                        | ttATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACtt  >  1:221627/1‑56 (MQ=255) ttATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACtt  <  2:221627/56‑1 (MQ=255)                                                        | TTATCCTTTTCCATATAAATATTGGATAAAAGTAGGACATCTGTTTGCAATTACTT  >  NZ_CP009273/2779632‑2779687

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑