Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2999213	2999295	83	5 [1]	[1] 2	ygeV/ygeW	sigma‑54‑dependent Fis family transcriptional regulator/knotted carbamoyltransferase YgeW

GACTGCGTAGTAGCAAGCTCCATAGCTTTACCTTCCAGACTTACTTAAAAGTCGATCATTGAAGACGTTGATGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAA  >  NZ_CP009273/2999123‑2999246                                                                                          |                                   gactgCGTAGTAGCAAGCTCCATAGCTTTACCTTCCAGACTTACTTAAAAGTCGATCATTGAAGACGTTGATGGTTCACAGATCatgatg                                    <  1:368834/90‑1 (MQ=255) gactgCGTAGTAGCAAGCTCCATAGCTTTACCTTCCAGACTTACTTAAAAGTCGATCATTGAAGACGTTGATGGTTCACAGATCatgatg                                    <  1:65432/90‑1 (MQ=255) gactgCGTAGTAGCAAGCTCCATAGCTTTACCTTCCAGACTTACTTAAAAGTCGATCATTGAAGACGTTGATGGTTCACAGATCatgatg                                    <  2:386125/90‑1 (MQ=255) gactgCGTAGTAGCAAGCTCCATAGCTTTACCTTCCAGACTTACTTAAAAGTCGATCATTGAAGACGTTGATGGTTCACAGATCatgatg                                    >  2:65432/1‑90 (MQ=255)                                   ccAGACTTACTTAAAAGTCGATCATTGAAGACGTTGATGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATaaaaa  >  2:347218/1‑90 (MQ=255)                                                                                          |                                   GACTGCGTAGTAGCAAGCTCCATAGCTTTACCTTCCAGACTTACTTAAAAGTCGATCATTGAAGACGTTGATGGTTCACAGATCATGATGATATTAACTCAGGCGAAATTGGCTTTGATAAAAA  >  NZ_CP009273/2999123‑2999246

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑