Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3221077	3221138	62	2 [1]	[0] 2	ygjI/ygjJ	amino acid permease/protein YgjJ

GCGCCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATAT  >  NZ_CP009273/3220987‑3221102                                                                                          |                           gcgcCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATgaggag                            >  2:418626/1‑90 (MQ=255)                           gcAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTatat  <  1:418626/90‑1 (MQ=255)                                                                                          |                           GCGCCATATTGAAGCGACGCCAGCCAGCAATGTTGATTAAGCAGAATAATAAAAAATGAGCAGGCATTTTCCCTCTTCCTGGATGAGGAGAGGGAAAATAGTTTCTGCCTTTATAT  >  NZ_CP009273/3220987‑3221102

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑