Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 3368045 3368091 47 2 [0] [1] 3 nanR/dcuC transcriptional regulator NanR/anaerobic C4‑dicarboxylate transporter DcuC

TCCCGTTTGAATTATTTATAAGACTATTCACGAGCATTAT  >  NZ_CP009273/3368005‑3368044
                                       |
tCCCGTTTGAATTATTTATAAGACTATTCACGAGCattat  >  1:383616/1‑40 (MQ=255)
tCCCGTTTGAATTATTTATAAGACTATTCACGAGCattat  <  2:383616/40‑1 (MQ=255)
                                       |
TCCCGTTTGAATTATTTATAAGACTATTCACGAGCATTAT  >  NZ_CP009273/3368005‑3368044

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: