Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3448783	3448836	54	2 [0]	[1] 2	gspA/gspC	type II secretion system protein GspA/type II secretion system protein GspC

AAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGAT  >  NZ_CP009273/3448730‑3448782                                                     | aaaGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGAt  <  1:104283/53‑1 (MQ=255) aaaGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGAt  >  2:104283/1‑53 (MQ=255)                                                     | AAAGAATAACTTCTCTTCTCGTAGACATAGAACTTCCTGTTTTAATTATTGAT  >  NZ_CP009273/3448730‑3448782

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑