Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3659357	3659431	75	2 [1]	[1] 3	gadX/gadA	acid resistance transcriptional activator GadX/glutamate decarboxylase

GGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAG  >  NZ_CP009273/3659267‑3659362                                                                                          |       ggAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAAt        <  2:375238/90‑1 (MQ=255)       cAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAg  <  2:298871/90‑1 (MQ=255)                                                                                          |       GGAGAACAGGATGATAATGTGTGATGTTCTACGGGCAGGATGACTGGATTTATAATACAAAAACGTGTTTAAGAACACAGGGAAATTAATAGTAAG  >  NZ_CP009273/3659267‑3659362

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑