Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3798358	3798511	154	2 [0]	[0] 2	[rfaS]	[rfaS]

TGATGAATAATCGCCCCAGCCATGCATTATCCATCCCTATTTTTGATATTTTT  >  NZ_CP009273/3798305‑3798357                                                     | tgatgaATAATCGCCCCAGCCATGCATTATCCATCCCTATTTTTGATAttttt  >  1:66339/1‑53 (MQ=255) tgatgaATAATCGCCCCAGCCATGCATTATCCATCCCTATTTTTGATAttttt  <  2:66339/53‑1 (MQ=255)                                                     | TGATGAATAATCGCCCCAGCCATGCATTATCCATCCCTATTTTTGATATTTTT  >  NZ_CP009273/3798305‑3798357

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑