Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4494516	4494523	8	2 [0]	[1] 2	nanX	MFS transporter

AGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACA  >  NZ_CP009273/4494476‑4494515                                        | aGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACcaca  >  1:338357/1‑40 (MQ=255) aGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACcaca  <  2:338357/40‑1 (MQ=255)                                        | AGGATAAATCAACATTTTTGTCTGTCTTCAGAAAACCACA  >  NZ_CP009273/4494476‑4494515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑