Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4529404	4529518	115	6 [1]	[1] 2	nanC/fimB	N‑acetylneuraminic acid outer membrane channel NanC/type 1 fimbria switch DNA invertase FimB

TTCATAAATTTCACTCATTTGTAGGATACAGAAAGCAATACAAAGCCCGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGCCAGGCTTATA  >  NZ_CP009273/4529314‑4529412                                                                                          |          ttCATAAATTTCACTCATTTGTAGGATACAGAAAGCAATACAAAGCCCGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGcc           <  1:10108/90‑1 (MQ=255) ttCATAAATTTCACTCATTTGTAGGATACAGAAAGCAATACAAAGCCCGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGcc           <  1:360736/90‑1 (MQ=255) ttCATAAATTTCACTCATTTGTAGGATACAGAAAGCAATACAAAGCCCGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGcc           <  2:71264/90‑1 (MQ=255)          ttCACTCATTTGTAGGATACAGAAAGCAATACAAAGCCCGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGCCAGGCTtata  <  1:82538/90‑1 (MQ=255)                                                cGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGcc           >  1:268414/1‑43 (MQ=255)                                                cGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGcc           <  2:268414/43‑1 (MQ=255)                                                                                          |          TTCATAAATTTCACTCATTTGTAGGATACAGAAAGCAATACAAAGCCCGCATAAACAATTAGCATTTATGTTGTGTAATATTTTTTTGCCAGGCTTATA  >  NZ_CP009273/4529314‑4529412

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑