Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	579890	579922	33	3 [1]	[0] 2	appY/ompT	DNA‑binding transcriptional activator AppY/omptin family outer membrane protease OmpT

TGGTGTCACGCCATCTCATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATAATGTTTATTACAAGT  >  NZ_CP009273/579814‑579903                                                                            |               tGGTGTCACGCCATCTCATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATAATGTTTATTACAAGt  <  1:147497/90‑1 (MQ=255)                     attTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATaa                <  1:270646/56‑1 (MQ=255)                     attTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATaa                >  2:270646/1‑56 (MQ=255)                                                                            |               TGGTGTCACGCCATCTCATTATTTTGAGAAAATAATCGGCGTCACAGATGGAATAAACAAAACAATTGACTGATAATGTTTATTACAAGT  >  NZ_CP009273/579814‑579903

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑