Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1193703	1193798	96	2 [1]	[0] 2	BW25113_RS05920/lit	hypothetical protein/cell death peptidase Lit

GCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGA  >  NZ_CP009273/1193799‑1193840 |                                          gCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCga  >  1:198231/1‑42 (MQ=255) gCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCga  <  2:198231/42‑1 (MQ=255) |                                          GCTTCGCTGACAGACAATATTGTGATCAGTAGCACGTATCGA  >  NZ_CP009273/1193799‑1193840

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 21 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑