Missing coverage evidence...
   seq id start end size ←reads reads→ gene description
* * ÷ NZ_CP009273 2491884 2491906 23 3 [1] [0] 2 alaC/ypdA alanine transaminase/two‑component system sensor histidine kinase YpdA

GGAACTCTGCTTTAAAAACAGGAAATTTATCTGCGCTAACAAGAAAATTACC  >  NZ_CP009273/2491907‑2491958
|                                                   
ggAACTCTGCTTTAAAAACAGGAAATTTATCTGCGCTAACAAGAAAATTAcc  <  1:265885/52‑1 (MQ=255)
ggAACTCTGCTTTAAAAACAGGAAATTTATCTGCGCTAACAAGAAAATTAcc  >  2:265885/1‑52 (MQ=255)
|                                                   
GGAACTCTGCTTTAAAAACAGGAAATTTATCTGCGCTAACAAGAAAATTACC  >  NZ_CP009273/2491907‑2491958

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap:     Deleted base: