Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3106864	3106866	3	2 [0]	[0] 2	yghG/pppA	type II secretion system pilot lipoprotein GspS‑beta/prepilin peptidase PppA

GTTAAAATGTCACTTTGATAATGACGTGGTTATCATTA  >  NZ_CP009273/3106867‑3106904 |                                      gTTAAAATGTCACTTTGATAATGACGTGGTTATCATTa  <  1:147250/38‑1 (MQ=255) gTTAAAATGTCACTTTGATAATGACGTGGTTATCATTa  >  2:147250/1‑38 (MQ=255) |                                      GTTAAAATGTCACTTTGATAATGACGTGGTTATCATTA  >  NZ_CP009273/3106867‑3106904

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑