Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3617657	3617713	57	2 [1]	[1] 3	BW25113_RS18035/yhhI	lyase/ISAs1‑like element ISEc1 family transposase

GATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTG  >  NZ_CP009273/3617703‑3617803            |                                                                                          gATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACaaa             >  1:33691/1‑90 (MQ=255)            ccTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTg  >  1:201774/1‑90 (MQ=40)            ccTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTg  >  2:385598/1‑90 (MQ=40)            |                                                                                          GATCAAATACTCCTTACCTAATTAAGGAGAACAAAATGGAACTTAAAAAATTGATGGAACATATTTCTATTATCCCCGATTACAGACAAACCTGGAAAGTG  >  NZ_CP009273/3617703‑3617803

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑