Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3900118	3900192	75	2 [1]	[0] 2	bglG/phoU	transcriptional antiterminator BglG/phosphate signaling complex protein PhoU

ATTGGGATTTGTCTGGTGAATTATTTGTCGCTATCTTTCCCCGCCA  >  NZ_CP009273/3900193‑3900238 |                                              aTTGGGATTTGTCTGGTGAATTATTTGTCGCTATCTTTCCCCGCca  >  1:251116/1‑46 (MQ=255) aTTGGGATTTGTCTGGTGAATTATTTGTCGCTATCTTTCCCCGCca  <  2:251116/46‑1 (MQ=255) |                                              ATTGGGATTTGTCTGGTGAATTATTTGTCGCTATCTTTCCCCGCCA  >  NZ_CP009273/3900193‑3900238

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 18 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑