Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	4241564	4241611	48	2 [0]	[0] 4	BW25113_RS20970	SopA family protein

TATATAAAAGATCCCATTATACGCAGTTATATCCATTCTGATGAAGATAACAAGTTCGATGATTTTATGCGTCAACATCGATTCAGTGAG  >  NZ_CP009273/4241612‑4241701 |                                                                                          tatataAAAGATCCCATTATACGCAGTTATATCCAt                                                        <  1:266162/36‑1 (MQ=255) tatataAAAGATCCCATTATACGCAGTTATATCCAt                                                        >  2:266162/1‑36 (MQ=255) tatataAAAGATCCCATTATACGCAGTTATATCCATTCTGATGAAGATAACAAGTTCGATGATTTTATGCGTCAACATCGATTCAGTGAg  >  1:217430/1‑90 (MQ=255) tatataAAAGATCCCATTATACGCAGTTATATCCATTCTGATGAAGATAACAAGTTCGATGATTTTATGCGTCAACATCGATTCAGTGAg  >  1:330965/1‑90 (MQ=255) |                                                                                          TATATAAAAGATCCCATTATACGCAGTTATATCCATTCTGATGAAGATAACAAGTTCGATGATTTTATGCGTCAACATCGATTCAGTGAG  >  NZ_CP009273/4241612‑4241701

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑