Predicted mutation | ||||||
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evidence | seq id | position | mutation | annotation | gene | description |
RA | NZ_CP009273 | 2,038,183 | (T)5→4 | intergenic (+78/‑236) | BW25113_RS10330 → / → yeeJ | tRNA‑Asn/inverse autotransporter adhesin YeeJ |
Read alignment evidence... | |||||||||||
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seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
* | NZ_CP009273 | 2,038,179 | 0 | T | . | 100.0% | 29.1 / NA | 8 | intergenic (+74/‑240) | BW25113_RS10330/yeeJ | tRNA‑Asn/inverse autotransporter adhesin YeeJ |
Reads supporting (aligned to +/- strand): ref base T (0/0); new base . (2/6); total (2/6) |
AAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTAT > NZ_CP009273/2038112‑2038260 | aaaaaTTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCg < 1:325035/90‑1 (MQ=255) cGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTa < 2:114596/90‑1 (MQ=255) ttAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGa < 2:346773/90‑1 (MQ=255) gcgcAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAggg < 1:154746/90‑1 (MQ=255) gcgcAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAggg < 2:121118/90‑1 (MQ=255) ttAGTTGAACATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGc > 2:191971/1‑90 (MQ=255) aCATTGTTTTTTAACGGATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCa > 2:201692/1‑90 (MQ=255) gATAGCGGG‑TTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATtat < 1:201692/90‑1 (MQ=255) | AAAAATTCGCTTTTTTAGCGCAATGTCACTGACCTTAGTTGAACATTGTTTTTTAACGGATAGCGGGTTTTTAACATCTTAAGCGCCCTCGACCTTTATGGTTGAGGGCGTTTTGCTATGAACGCCATCACCATTTTCCCCTCGATTAT > NZ_CP009273/2038112‑2038260 |
Alignment Legend |
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Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |