| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 4,330,415 | A→G | intergenic (‑77/+122) | adiA ← / ← melR | arginine decarboxylase/transcriptional regulator MelR |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 4,330,415 | 0 | A | G | 100.0% | 43.2 / NA | 14 | intergenic (‑77/+122) | adiA/melR | arginine decarboxylase/transcriptional regulator MelR |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base G (7/7); total (7/7) | |||||||||||
TTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGA > NZ_CP009273/4330333‑4330498 | tttCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAaaacaa > 1:224038/1‑90 (MQ=255) tGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTg > 2:400269/1‑90 (MQ=255) cGGTTCTGAAGGAGTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATAttt < 2:230321/90‑1 (MQ=255) cGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATAttt < 1:35194/90‑1 (MQ=255) ttATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGt > 2:356201/1‑90 (MQ=255) aaGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTtat < 1:356201/90‑1 (MQ=255) aGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTtata < 1:143037/90‑1 (MQ=255) ggAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTTATaa < 2:35127/90‑1 (MQ=255) aaTCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTTATAAAc > 1:148040/1‑90 (MQ=255) tCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTta < 1:145487/80‑1 (MQ=255) tCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTta > 2:145487/1‑80 (MQ=255) aGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGatta < 1:120977/90‑1 (MQ=255) gCCTTTTCGGGCTGTAAAGCGCGTGGAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAattat > 2:260740/1‑90 (MQ=255) cgcgTGGAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGa > 2:155500/1‑90 (MQ=255) | TTTCATCATTGCTTACCCGGTTATGAAGGAATCTTCGTTGCGGGCAAGTATCTTCCGGCCTTTTCGGGCTGTAAAGCGCGTGAAAAACAAACATTTTTGAAATATTTAGTTTTATAAACAATACGTTATGTGATTATTTTAAATTATTTTCACTGCTTATTATCGA > NZ_CP009273/4330333‑4330498 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |