| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,321,615 | T→C | F169F (TTT→TTC) | rluB → | 23S rRNA pseudouridine(2605) synthase RluB |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,321,615 | 0 | T | C | 100.0% | 47.9 / NA | 15 | F169F (TTT→TTC) | rluB | 23S rRNA pseudouridine(2605) synthase RluB |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (8/7); total (8/7) | |||||||||||
GTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTTAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGACCGAAGGCCGTAACCGTGAAGTTCGT > NZ_CP009273/1321532‑1321699 | gtgcgtgTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAAcc > 2:41062/1‑90 (MQ=255) tgcgtgTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCa > 1:145672/1‑90 (MQ=255) gcgtgTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCAt > 2:70665/1‑90 (MQ=255) cgcgAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGAt < 1:304156/90‑1 (MQ=255) cgcgAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGAt < 2:355730/90‑1 (MQ=255) aaCTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAAcc < 1:230675/90‑1 (MQ=255) aaCTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAAcc < 2:389198/90‑1 (MQ=255) gCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCATCa < 1:402789/59‑1 (MQ=255) gCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTCAAAACCATCa > 2:402789/1‑59 (MQ=255) gAAGATGGTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGACCGAAGGCCGt < 2:60836/90‑1 (MQ=255) ggTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGaa > 1:152924/1‑42 (MQ=255) ggTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGaa < 2:152924/42‑1 (MQ=255) ggTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGGCCGAAGGCCGTAACCgg > 1:225052/1‑89 (MQ=255) ggTCCGGCAGCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGACCGAAGGCCGTAACCGt > 1:108737/1‑90 (MQ=255) gCTTTCAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGACCGAAGGCCGTAACCGTGAAGTtcgt > 2:367689/1‑90 (MQ=255) | GTGCGTGTATTTGGTCAGGTTGACGACGCGAAACTGCGTGATTTGAGTCGTGGCGTGCAGTTGGAAGATGGTCCGGCAGCTTTTAAAACCATCAAGTTCAGCGGCGGCGAAGGGATCAACCAGTGGTACAACGTGACTCTGACCGAAGGCCGTAACCGTGAAGTTCGT > NZ_CP009273/1321532‑1321699 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |