| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 538,997 | T→C | D169G (GAT→GGT) | allE ← | (S)‑ureidoglycine aminohydrolase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 538,997 | 0 | T | C | 100.0% | 120.8 / NA | 34 | D169G (GAT→GGT) | allE | (S)‑ureidoglycine aminohydrolase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (16/18); total (16/18) | |||||||||||
GTGTTTCGATATAACCGTGGCTGGCACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAATCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTGCCAGAAACCAGCCACGGTGCATAG > NZ_CP009273/538911‑539080 | gtgtTTCGATATAACCGTGGCTGGCACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCca > 2:200405/1‑90 (MQ=255)gtgtTTCGATATAACCGTGGCTGGCACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCGAACTCTTTGGGCAGAAAACCca > 2:400915/1‑90 (MQ=255) aaCCGTGGCTGGCACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACAt < 2:856709/90‑1 (MQ=255) aaCCGTGGCTGGCACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACAt < 2:591857/90‑1 (MQ=255) aCCGTGGCTGGCACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATc < 2:410361/90‑1 (MQ=255) ggctggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCcagc > 1:240055/1‑74 (MQ=255) ggctggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCcagc < 2:240055/74‑1 (MQ=255) ggctggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCa > 2:867780/1‑90 (MQ=255) gctggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt < 2:549494/90‑1 (MQ=255) gctggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt < 1:811584/90‑1 (MQ=255) gctggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt < 2:388521/90‑1 (MQ=255) gctggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt < 2:109552/90‑1 (MQ=255) tggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGc < 1:597807/90‑1 (MQ=255) tggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGc < 2:486701/90‑1 (MQ=255) ggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCcagc > 2:978963/1‑70 (MQ=255) ggcACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCcagc < 1:978963/70‑1 (MQ=255) gTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCcagc < 1:933357/62‑1 (MQ=255) gTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCcagc > 2:933357/1‑62 (MQ=255) agGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTcc > 2:671213/1‑90 (MQ=255) gCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGc > 1:436112/1‑90 (MQ=255) tGTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTgg > 1:740349/1‑90 (MQ=255) gTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt > 1:121470/1‑57 (MQ=255) gTTCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt < 2:121470/57‑1 (MQ=255) tCATATCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCAt < 2:401499/90‑1 (MQ=255) atatCAAAACCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTg > 2:644746/1‑90 (MQ=255) atatCAAAACCTAACTCTTTGGGCAGAAAACCCAGAAGAATAACATCGTCCATGc > 2:376911/1‑55 (MQ=255) atatCAAAACCTAACTCTTTGGGCAGAAAACCCAGAAGAATAACATCGTCCATGc < 1:376911/55‑1 (MQ=255) aaaaCCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt > 2:509183/1‑48 (MQ=255) aaaaCCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCAt < 1:509183/48‑1 (MQ=255) aaaCCTAACTCTTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTGCCAGaa > 2:40251/1‑90 (MQ=255) ctctTTGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTGCCAGAAACCAGCCa < 2:273618/90‑1 (MQ=255) ttGGGCAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTGCCAGAAACCAGCCACGGt > 2:712743/1‑90 (MQ=255) cAGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTGCCAGAAACCAGCCACGGTGCATa < 1:644746/90‑1 (MQ=255) aGAAAACCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTGCCAGAAACCAGCCACGGTGCATAg > 1:808253/1‑90 (MQ=255) | GTGTTTCGATATAACCGTGGCTGGCACCTGGTGCAAAAGAGAGGATATGCATGTTCATATCAAAACCTAACTCTTTGGGCAGAAAATCCAGCAGAATAACATCGTCCATGCCTTCATAATGAATGCGTTCCAGTTCGCTGGCATTGCCAGAAACCAGCCACGGTGCATAG > NZ_CP009273/538911‑539080 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |