| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 847,509 | T→C | D182G (GAT→GGT) | opgE ← | phosphoethanolamine transferase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 847,509 | 0 | T | C | 100.0% | 62.0 / NA | 18 | D182G (GAT→GGT) | opgE | phosphoethanolamine transferase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (9/9); total (9/9) | |||||||||||
GTGACCGTCCAGGTATCTTTCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACATCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTAAATACGCCACCCCAGGCCAGGTTTTGCACGGGAGCAACA > NZ_CP009273/847425‑847592 | gTGACCGTCCAGGTATCTTTCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTa > 1:597450/1‑90 (MQ=255) cGTCCAGGTATCTTTCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCaaa > 1:379733/1‑90 (MQ=255) cAGGTATCTTTCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGa < 2:27442/90‑1 (MQ=255) tATCTTTCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATa < 2:351053/90‑1 (MQ=255) cTTTCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTATCAAAACGAAATACCg > 2:980409/1‑90 (MQ=255) ttCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGa < 1:174409/90‑1 (MQ=255) ttCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGa < 2:1000125/90‑1 (MQ=255) aTTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAg > 2:854913/1‑90 (MQ=255) tCCAGAAAGTTTTGCCCTCCGTTCAAGATATTCAATCCCCTCGTTATTATTTCCGTTGCCTCCCTTAGCAAAACCACATACCGGATAGcc < 2:913242/90‑1 (MQ=255) ggAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAGCCAGt > 1:260481/1‑90 (MQ=255) ccGTTCTTGCTCTTCAATCCCCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTaaa < 2:800986/90‑1 (MQ=255) tctTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAGcc < 1:1007734/62‑1 (MQ=255) tctTCAATCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAGcc > 2:1007734/1‑62 (MQ=255) tCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTAAATACGCCACCccaggcca < 2:982731/90‑1 (MQ=255) tCACCTCGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTAAATACGCCACCccaggaca < 1:71031/90‑1 (MQ=255) cGTTATTATTGGCGATGACACCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTAAATACGCCACCCCAGGCCCGGtttt > 1:160229/1‑90 (MQ=255) cGTTATTATTGACGATGACACCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTAAATACGCCACCCCAGGCCAGGtttt > 1:454731/1‑90 (MQ=255) aTGACACCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTAAATACGCCACCCCAGGCCAGGTTTTGCACGGGAGcaaca > 2:447105/1‑90 (MQ=255) | GTGACCGTCCAGGTATCTTTCATTCCGGAAAGTTTTGCCATCCGTTCTTGCTCTTCAATCACCTCGTTATTATTGACGATGACATCCTTAGCAAAACGAAATACCGGATAGCCAGTATCTTTCAGTTTAAATACGCCACCCCAGGCCAGGTTTTGCACGGGAGCAACA > NZ_CP009273/847425‑847592 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |