| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,056,010 | T→C | I433I (ATT→ATC) | torA → | trimethylamine‑N‑oxide reductase TorA |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,056,010 | 0 | T | C | 100.0% | 75.4 / NA | 22 | I433I (ATT→ATC) | torA | trimethylamine‑N‑oxide reductase TorA |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (11/11); total (11/11) | |||||||||||
TTGGTTTTGGCTGGCACTACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATTCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGCCCGTTTTATCGATGCGATCCTCGAACCGG > NZ_CP009273/1055925‑1056095 | ttggttttggCTGGCACTACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGc > 1:691394/1‑90 (MQ=255) ttggCTGGCACTACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTc > 2:1036651/1‑90 (MQ=255) gctgccACTACAACGGCGCAGGCCCGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTCCTCCGGCTCTACGTCGATCCCGCCTGTTCACg < 2:283924/90‑1 (MQ=255) ggcACTACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGaca > 2:779697/1‑90 (MQ=255) tACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGt > 2:412443/1‑90 (MQ=255) aCAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGTg > 2:85353/1‑90 (MQ=255) cGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGa < 1:296016/78‑1 (MQ=255) cGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGa > 2:296016/1‑78 (MQ=255) gcgcAGGCACGCCGGGGCTTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGCTCCCGcc < 2:407618/67‑1 (MQ=255) gcgcAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGcc > 1:407618/1‑67 (MQ=255) cgcAGGCCCGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGTGACTACaa < 1:278459/90‑1 (MQ=255) cgcAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGTGACTACaa < 1:111891/90‑1 (MQ=255) cgcAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGTGACTACaa < 2:620572/90‑1 (MQ=255) tttCTGAGTGGTTTCTCTGTCTCTACGTCGATCCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGcc < 2:1072436/89‑1 (MQ=255) aTTCTGAGTGGTTTCCCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGcc < 2:726466/90‑1 (MQ=255) gAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGTGACTACAAAGGCTAcagc < 1:678414/67‑1 (MQ=255) gAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGTGACTACAAAGGCTAcagc > 2:678414/1‑67 (MQ=255) gAGTGGTTTCTCCGGCTCTACGTCGATCCCGCCTGTTCACGACAACAGGGACTACAAAGGCTACAGCAGCACTATTCCGATTGCCCGttt > 1:1072436/1‑90 (MQ=255) ctACGTCGATCCCGCCTGTTCACGACAACAGTGACTACaa > 2:1040611/1‑40 (MQ=39) ctACGTCGATCCCGCCTGTTCACGACAACAGTGACTACaa < 1:1040611/40‑1 (MQ=255) aCGTCGATCCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGCCCGTTTTATCGATGCGATCCTCGaa < 1:412443/90‑1 (MQ=255) cGATCCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGCCCGTTTTATCGATGCGATCCTCGAACCgg > 1:117360/1‑90 (MQ=255) | TTGGTTTTGGCTGGCACTACAACGGCGCAGGCACGCCGGGGCGTAAAGGCGTTATTCTGAGTGGTTTCTCCGGCTCTACGTCGATTCCGCCTGTTCACGACAACAGTGACTACAAAGGCTACAGCAGCACTATTCCGATTGCCCGTTTTATCGATGCGATCCTCGAACCGG > NZ_CP009273/1055925‑1056095 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 8 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |