| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 1,749,862 | A→C | H37P (CAC→CCC) | BW25113_RS26160 → | protein YnhH |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 1,749,862 | 0 | A | C | 100.0% | 69.8 / NA | 21 | H37P (CAC→CCC) | BW25113_RS26160 | protein YnhH |
| Reads supporting (aligned to +/- strand): ref base A (0/0); new base C (11/10); total (11/10) | |||||||||||
ACAGGCACTCACGTTGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTA > NZ_CP009273/1749781‑1749946 | aCAGGCACTCACGTTGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCCCCACCACt < 2:717793/90‑1 (MQ=255)aCAGGCACTCACGTTGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCCCCACCACt < 2:422721/90‑1 (MQ=255) aGCACACCTTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCa < 2:414861/90‑1 (MQ=255) ttCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGccccacc > 2:734493/1‑51 (MQ=255) ttCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGccccacc < 1:734493/51‑1 (MQ=255) ttCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGccc > 1:497749/1‑90 (MQ=255) gCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGc < 2:774820/90‑1 (MQ=255) cACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCa > 2:728272/1‑90 (MQ=255) tttttCGATGTCACCTATCCTTAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGttt < 1:728272/90‑1 (MQ=255) tATCCTTAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCa < 2:730834/90‑1 (MQ=255) tAGAGCGAGTCCCCACCACGTTCGTAATACCGGCTTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTCCTCCCATCCTTCTCCACTTaa < 2:379842/90‑1 (MQ=255) tAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaa > 1:202379/1‑90 (MQ=255) tAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaa < 2:583203/90‑1 (MQ=255) tAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaa < 2:495725/90‑1 (MQ=255) tAGAGCGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTaa > 1:495725/1‑90 (MQ=255) cGAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagact > 1:968318/1‑90 (MQ=255) gAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta > 2:193170/1‑90 (MQ=255) gAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta > 2:709669/1‑90 (MQ=255) gAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta > 1:374570/1‑90 (MQ=255) gAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta > 1:340964/1‑90 (MQ=255) gAGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAaagacta > 2:818798/1‑90 (MQ=255) aGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCa < 2:1636/50‑1 (MQ=255) aGGCCCCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCa > 1:1636/1‑50 (MQ=255) | ACAGGCACTCACGTTGGGCTGAGACACAAGCACACATTCCTCTGCACGCTTTTTCGATGTCACCTATCCTTAGAGCGAGGCACCACCACTTTCGTAATACCGGATTCGCTTTCCGGCAGTGCGCCCAGAAAGCAAGTTTCTCCCATCCTTCTCAACTTAAAGACTA > NZ_CP009273/1749781‑1749946 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 13 ≤ ATCG/ATCG < 30 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |