| Predicted mutation | ||||||
|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | annotation | gene | description |
| RA | NZ_CP009273 | 2,968,720 | T→C | G218G (GGA→GGG) | aas ← | bifunctional acyl‑ACP‑‑phospholipid O‑acyltransferase/long‑chain‑fatty‑acid‑‑ACP ligase |
| Read alignment evidence... | |||||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | ref | new | freq | score (cons/poly) | reads | annotation | genes | product | ||
| * | NZ_CP009273 | 2,968,720 | 0 | T | C | 100.0% | 111.1 / NA | 31 | G218G (GGA→GGG) | aas | bifunctional acyl‑ACP‑‑phospholipid O‑acyltransferase/long‑chain‑fatty‑acid‑‑ACP ligase |
| Reads supporting (aligned to +/- strand): ref base T (0/0); new base C (14/17); total (14/17) | |||||||||||
GATGCGTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCTCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCATTCGCGCTTCCATCATTATTTGAT > NZ_CP009273/2968633‑2968805 | gATGCGTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGcccc > 1:1007393/1‑90 (MQ=255) tGCGTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGa < 1:693857/90‑1 (MQ=255) gCGTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGaa > 2:224100/1‑90 (MQ=255) gCGTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGaa > 2:146394/1‑90 (MQ=255) gCGTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGaa > 1:897362/1‑90 (MQ=255) gTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGc < 2:94543/90‑1 (MQ=255) gCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCAc < 1:833491/90‑1 (MQ=255) gCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCAc < 1:568409/90‑1 (MQ=255) gCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCAc < 1:971169/90‑1 (MQ=255) ttttCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCa < 2:126601/90‑1 (MQ=255) tAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAg < 1:129350/90‑1 (MQ=255) tAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGtt > 2:97377/1‑90 (MQ=255) tAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGtt > 2:671336/1‑90 (MQ=255) ggAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTc > 1:531208/1‑90 (MQ=255) tCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGcccc < 1:365246/44‑1 (MQ=255) cTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCAcgcg > 1:591425/1‑90 (MQ=255) gggTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGgc < 1:757798/90‑1 (MQ=255) ggTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGa < 2:1068937/41‑1 (MQ=255) ggTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGa > 1:1068937/1‑41 (MQ=255) tAAAGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCa < 2:591425/90‑1 (MQ=255) aaGTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCAcc > 1:594283/1‑90 (MQ=255) gTTGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGc < 1:253774/90‑1 (MQ=255) gTTGACCTCTTCGACACATTTCTCCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTCCACGCGGGCGAACCGc < 2:187166/90‑1 (MQ=255) tGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAg < 1:35359/57‑1 (MQ=255) tGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAg > 2:35359/1‑57 (MQ=255) tGACGTCTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCa > 1:23814/1‑90 (MQ=255) cTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGt > 2:1043999/1‑64 (MQ=255) cTTCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGt < 1:1043999/64‑1 (MQ=255) tCGACACATTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCATTCGCGCt < 2:854880/90‑1 (MQ=255) acaTTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCATTCGCGCTTCcat < 1:671336/90‑1 (MQ=255) acaTTTCTTCCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCATTCGCGCTTCcat < 1:97377/90‑1 (MQ=255) cttcCCGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCATTCGCGCTTCCATCattat > 1:737/1‑90 (MQ=255) cGGCCCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCATTCGCGCTTCCATCATTATTTGAt > 1:215310/1‑90 (MQ=255) | GATGCGTCCAACAAACAGCGTTTTCGTAAGCAATTTGCGATAGGAGTCTGGGGTAAAGTTGACGTCTTCGACACATTTCTTCCCGGCTCCGAAGCGGTACATTGCACTCAGTAAAGATTCGTACAGCGTTTCACGCGGGCGCACCGCCATTCGCGCTTCCATCATTATTTGAT > NZ_CP009273/2968633‑2968805 |
| Alignment Legend |
|---|
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG |
Unaligned base: atcg Masked matching base: atcg Alignment gap: ‑ Deleted base: ‑ |