Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1188270	1188279	10	2 [0]	[1] 2	mnmA	tRNA 2‑thiouridine(34) synthase MnmA

GTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGAC  >  NZ_CP009273/1188224‑1188269                                              | gTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGAc  <  1:43658/46‑1 (MQ=255) gTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGAc  >  2:43658/1‑46 (MQ=255)                                              | GTTCATCGAAAATCACTTCAATGCGATCATCGTCCAGCGCCTTGAC  >  NZ_CP009273/1188224‑1188269

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑