Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1362637	1362647	11	2 [0]	[1] 2	pspA	phage shock protein PspA

TGGCACGTGCAGCGTTAATTGAAAAACAGAAACTGACCGATCTGA  >  NZ_CP009273/1362592‑1362636                                             | tGGCACGTGCAGCGTTAATTGAAAAACAGAAACTGACCGATCTGa  >  1:295368/1‑45 (MQ=255) tGGCACGTGCAGCGTTAATTGAAAAACAGAAACTGACCGATCTGa  <  2:295368/45‑1 (MQ=255)                                             | TGGCACGTGCAGCGTTAATTGAAAAACAGAAACTGACCGATCTGA  >  NZ_CP009273/1362592‑1362636

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑