Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1469332	1469349	18	2 [1]	[1] 2	[pdxI]	[pdxI]

AAAAGGGAAAGATGCATTTCCCTTTTTTTCTTTTTTAATGGCATGGAGTGCATATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTACTG  >  NZ_CP009273/1469348‑1469439   |                                                                                          aaaaGGGAAAGATGCATTTCCCTTTTTTTCTTTTTTAATGGCATGGAGTGCATATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTAc    <  2:325186/90‑1 (MQ=255)   aaGGGAAAGATGCATTTCCCTTTTTTTCTTTTTTAATGGCATGGAGTGCATATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTACTg  >  1:287607/1‑90 (MQ=255)   |                                                                                          AAAAGGGAAAGATGCATTTCCCTTTTTTTCTTTTTTAATGGCATGGAGTGCATATGTTGAAGGCCAGGAATTGCGGCTGGATACGTTTACTG  >  NZ_CP009273/1469348‑1469439

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 19 ≤ ATCG/ATCG < 29 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑