Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1796177	1796217	41	2 [1]	[1] 2	thrS	threonine‑‑tRNA ligase

TGCTGTCGCCACGCCAGTAAGCCCCTGCCGTTTTCATTAGTTTGAAATGATGGCAGAAACGCATGTTCGGTACGTGCGGACCGCGGCACATATCGACATATTCTTCATGGA  >  NZ_CP009273/1796197‑1796307                      |                                                                                          tgCTGTCGCCACGCCAGTAAGCCCCTGCCGTTTTCATTAGTTTGAAATGATGGCAGAAACGCATGTTCGGTACGTGCGGACCGCGGcaca                       >  2:185660/1‑90 (MQ=255)                      ccccTGCCGTTTTCATTAGTTTGAAATGATGGCAGAAACGCATGTTCGGTACGTGCGGACCGCGGCACATATCGACATATTCTTCATGGa  <  2:245313/90‑1 (MQ=255)                      |                                                                                          TGCTGTCGCCACGCCAGTAAGCCCCTGCCGTTTTCATTAGTTTGAAATGATGGCAGAAACGCATGTTCGGTACGTGCGGACCGCGGCACATATCGACATATTCTTCATGGA  >  NZ_CP009273/1796197‑1796307

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑