Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2099584	2099664	81	2 [1]	[0] 3	wzy	O16 family O‑antigen polymerase

AAATATGAATAAAATATTTTCACAGATATGTAATTTCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAA  >  NZ_CP009273/2099665‑2099754 |                                                                                          aaataTGAATAAAATATTTTCACAGATATGTAATTTCGAGACAATCTCCATAAAACACCTGAAATAc                         <  1:125323/67‑1 (MQ=255) aaataTGAATAAAATATTTTCACAGATATGTAATTTCGAGACAATCTCCATAAAACACCTGAAATAc                         >  2:125323/1‑67 (MQ=255) aaataTGAATAAAATATTTTCACAGATATGTAATTTCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCaaa  >  1:129449/1‑90 (MQ=255) |                                                                                          AAATATGAATAAAATATTTTCACAGATATGTAATTTCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAA  >  NZ_CP009273/2099665‑2099754

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑