Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2251102	2251120	19	2 [1]	[1] 4	psuG	pseudouridine‑5'‑phosphate glycosidase

GTTCCGGCATAGCAAACTGTTCCGGGATCGGGTTCGCTACCACGAGGCCACCGTTCAGACCGCTTTGCCATTTCACCACCATTGCACGGGCAATTTCGCT  >  NZ_CP009273/2251111‑2251210           |                                                                                          gtTCCGGCATAGCAAACTGTTCCGGGATCGGGTTCGCTACCACGAGGCCACCGTTCAGACCGCTTTGCCATTTCACCACCATTGCACggg            >  2:298307/1‑90 (MQ=255)           aGCAAACTGTTCCGGGATCGGGTTCGCTACCACGAGGCCACCGTTCAGACCGCTTTGCCATTTCACCACCATTGCACGGGCAATTTCGCt  >  1:168325/1‑90 (MQ=255)           aGCAAACTGTTCCGGGATCGGGTTCGCTACCACGAGGCCACCGTTCAGACCGCTTTGCCATTTCACCACCATTGCACGGGCAATTTCGCt  >  1:304870/1‑90 (MQ=255)           aGCAAACTGTTCCGGGATCGGGTTCGCTACCACGAGGCCACCGTTCAGACCGCTTTGCCATTTCACCACCATTGCACGGGCAATTTCGCt  >  1:304871/1‑90 (MQ=255)           |                                                                                          GTTCCGGCATAGCAAACTGTTCCGGGATCGGGTTCGCTACCACGAGGCCACCGTTCAGACCGCTTTGCCATTTCACCACCATTGCACGGGCAATTTCGCT  >  NZ_CP009273/2251111‑2251210

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑