Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2605127	2605162	36	2 [1]	[0] 2	hyfJ	hydrogenase 4 assembly chaperone HyfJ

CATTCATCTGTTGGATGAAATTGTGCAGGAACCGGCCA  >  NZ_CP009273/2605163‑2605200 |                                      cattcatCTGTTGGATGAAATTGTGCAGGAACCGGCCa  <  1:164852/38‑1 (MQ=255) cattcatCTGTTGGATGAAATTGTGCAGGAACCGGCCa  >  2:164852/1‑38 (MQ=255) |                                      CATTCATCTGTTGGATGAAATTGTGCAGGAACCGGCCA  >  NZ_CP009273/2605163‑2605200

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑