Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2924822	2924831	10	3 [0]	[1] 3	xni	flap endonuclease Xni

ATTCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTGGCGTTCAACCGCAGCAGTTGCCCGATTACTGGG  >  NZ_CP009273/2924831‑2924921  |                                                                                          aTTCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTGGCGTTCAACCGCAGCAGTTGCCCGATTACTgg   >  2:232266/1‑90 (MQ=255)  ttCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTTGCGTTCAACCGCAGCAGTTGCCCGATTACTggg  >  2:202293/1‑90 (MQ=255)  ttCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTGGCGTTCAACCGCAGCAGTTGCCCGATTACTggg  >  1:233004/1‑90 (MQ=255)  |                                                                                          ATTCGTGATTACTTCCAGAAACGTTGGCTGGATGCGCCATTTATCGATAAAGAATTTGGCGTTCAACCGCAGCAGTTGCCCGATTACTGGG  >  NZ_CP009273/2924831‑2924921

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 37 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑