Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	513469	513498	30	2 [1]	[0] 2	cnoX	chaperedoxin

CGGAATCGCACGCAGACCAAACTGCGCGGCAATCATCTGCTCCGCGTCGCAGTCCAGCTTCGCCAGAATAAATTGCCCGTTGTACTGCGC  >  NZ_CP009273/513499‑513588 |                                                                                          cGGAATCGCACGCAGACCAAACTGCGCGGCAATCATCTGCTCCGCGTCGCAGTCCAGCTTCGCCAGAATAAATTGCCCGTTGTACTgcgc  >  1:260972/1‑90 (MQ=255) cGGAATCGCACGCAGACCAAACTGCGCGGCAATCATCTGCTCCGCGTCGCAGTCCAGCTTCGCCAGAATAAATTGCCCGTTGTACTgcgc  >  2:265667/1‑90 (MQ=255) |                                                                                          CGGAATCGCACGCAGACCAAACTGCGCGGCAATCATCTGCTCCGCGTCGCAGTCCAGCTTCGCCAGAATAAATTGCCCGTTGTACTGCGC  >  NZ_CP009273/513499‑513588

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 15 ≤ ATCG/ATCG < 22 ≤ ATCG/ATCG < 27 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑