Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	548887	548931	45	2 [1]	[1] 2	lpxH	UDP‑2,3‑diacylglucosamine diphosphatase

GTTGGCTTCTTTGCTGTTCGCGCGCATTCGCGCGGCAATGCGTTTGCGCACAAACAACGGCAGGGCGAGGAATAGCGTCTGCAGCCAGGGTTTGTGGACCTTGGCGCGAAAAGCCTG  >  NZ_CP009273/548905‑549021                            |                                                                                          gTTGGCTTCTTTGCTGTTCGCGCGCATTCGCGCGGCAATGCGTTTGCGCACAAACAACGGCAGGGGGAGGAATAGCGTCTGCAGCCCggg                             >  1:270984/1‑90 (MQ=255)                            tCGCGCGGCAATGCGTTTGCGCACAAACAACGGCAGGGCGAGGAATAGCGTCTGCAGCCAGGGTTTGTGGACCTTGGCGCGAAAAGCCTg  <  2:210221/90‑1 (MQ=255)                            |                                                                                          GTTGGCTTCTTTGCTGTTCGCGCGCATTCGCGCGGCAATGCGTTTGCGCACAAACAACGGCAGGGCGAGGAATAGCGTCTGCAGCCAGGGTTTGTGGACCTTGGCGCGAAAAGCCTG  >  NZ_CP009273/548905‑549021

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 10 ≤ ATCG/ATCG < 20 ≤ ATCG/ATCG < 31 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑