Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1524311	1524343	33	5 [1]	[1] 2	BW25113_RS07645/BW25113_RS26145	RHS repeat protein/hypothetical protein

TTTGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGA  >  NZ_CP009273/1524225‑1524314                                                                                      |     tttGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTgaga  <  1:176361/90‑1 (MQ=255)                             tGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGtt      <  1:157483/58‑1 (MQ=255)                             tGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGtt      >  2:157483/1‑58 (MQ=255)                              gATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGtt      >  1:51439/1‑57 (MQ=255)                              gATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGtt      <  2:51439/57‑1 (MQ=255)                                                                                      |     TTTGTTTATTTGTTGTTTACCTTGGGTTTGATAACAATTCAAATTCTGACATCGTATTTTATGGACATAAAACACCAAAGAGCGTTGAGA  >  NZ_CP009273/1524225‑1524314

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 32 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑