Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2047096	2047111	16	3 [0]	[1] 2	BW25113_RS10340/shiA	glycosyltransferase family 9 protein/shikimate transporter

AAAATCATTTGCAGATGCGCTCTGTCGAGGTAGTCTCATAAGGTTCGTTTATAGATCGACGGCAATGTGAGTTACCTTTTCCATACTAATT  >  NZ_CP009273/2047005‑2047095                                                                                           | aaaaTCATTTGCAGATGCGCTCTGTCGAGGTAGTCTCATAAGGTTCG‑TTATAGATCGACGGCAATGTGAGTTACCTTTTCCATACTAAtt  <  2:171778/90‑1 (MQ=255)  aaaTCATTTGCAGATGCGCTCTGTCGAGGTAGTCTCATAAGGTTCGTTTATAGATCGACGGCAATGTGAGTTACCTTTTCCATACTAAtt  <  1:216872/90‑1 (MQ=255)  aaaTCATTTGCAGATGCGCTCTGTCGAGGTAGTCTCATAAGGTTCGTTTATAGATCGACGGCAATGTGAGTTACCTTTTCCATACTAAtt  <  2:282090/90‑1 (MQ=255)                                                                                           | AAAATCATTTGCAGATGCGCTCTGTCGAGGTAGTCTCATAAGGTTCGTTTATAGATCGACGGCAATGTGAGTTACCTTTTCCATACTAATT  >  NZ_CP009273/2047005‑2047095

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 11 ≤ ATCG/ATCG < 24 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑