Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	3471307	3471319	13	2 [1]	[1] 2	slyD	peptidylprolyl isomerase

GCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCAC‑TTTTTCGGTATTAGTGGCAACCGCAA‑CCGCCGTTGCCTTTACCGCCACAGCAGCC  >  NZ_CP009273/3471219‑3471310                                                                                          |     gggaaaaaaaaaGGGGGGTTCCCCCCTTTTTTTTTTCTTTTTTGGGTTTTTGGGGAAACCCAAACCCGCCGTTGCCTTTACCGCCAcagc      <  1:223019/86‑1 (MQ=255)   gTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCAC‑TTTTTCGGTATTAGTGGCAACCGCAA‑CCGCCGTTGCCTTTACCGCCACAGCAGcc  >  1:40062/1‑90 (MQ=255)                                                                                          |     GCGTAAAAAAAGCGGGGATTCCCCGCTTTTTTGTCAC‑TTTTTCGGTATTAGTGGCAACCGCAA‑CCGCCGTTGCCTTTACCGCCACAGCAGCC  >  NZ_CP009273/3471219‑3471310

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 5 ≤ ATCG/ATCG < 7 ≤ ATCG/ATCG < 26 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑