Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1028371	1028386	16	2 [0]	[1] 2	hyaA	hydrogenase 1 small subunit

GCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTTCGTCCAGAGTTGGGATGATGACGCTGCCCGCAAAGGTTA  >  NZ_CP009273/1028281‑1028370                                                                                          | gCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTTCGTCCAGAGTTGGGATGATGACGCTGCCCGCAAAGGTTa  >  1:274833/1‑90 (MQ=255) gCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTTCGTCCAGAGTTGGGATGATGACGCTGCCCGCAAAGGTTa  <  2:274833/90‑1 (MQ=255)                                                                                          | GCGAATCCACGATAAATGCTATCGCCGCGCCCACTTCGACGCCGGAGAGTTCGTCCAGAGTTGGGATGATGACGCTGCCCGCAAAGGTTA  >  NZ_CP009273/1028281‑1028370

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 33 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 36 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑