Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	1683466	1683471	6	2 [0]	[0] 2	manA	mannose‑6‑phosphate isomerase

TGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAG  >  NZ_CP009273/1683472‑1683515 |                                            tGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAg  <  1:296403/44‑1 (MQ=255) tGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAg  >  2:296403/1‑44 (MQ=255) |                                            TGGCAAACGATTCGTTTAATTTCTGAATTTTACCCGGAAGACAG  >  NZ_CP009273/1683472‑1683515

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 34 ≤ ATCG/ATCG < 35 ≤ ATCG/ATCG < 38 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑