Missing coverage evidence...
			seq id	start	end	size	←reads	reads→	gene	description
*	*	÷	NZ_CP009273	2099664	2099698	35	2 [1]	[0] 2	wzy	O16 family O‑antigen polymerase

TTCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAAT  >  NZ_CP009273/2099699‑2099755 |                                                         ttCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAAt  <  1:147771/57‑1 (MQ=255) ttCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAAt  >  2:147771/1‑57 (MQ=255) |                                                         TTCGAGACAATCTCCATAAAACACCTGAAATACAGCCATGAATAACCATCATCAAAT  >  NZ_CP009273/2099699‑2099755

Alignment Legend
Aligned base mismatch/match (shaded by quality score): ATCG/ATCG < 3 ≤ ATCG/ATCG < 39 ≤ ATCG/ATCG < 40 ≤ ATCG/ATCG < 41 ≤ ATCG/ATCG
Unaligned base: atcg    Masked matching base: atcg    Alignment gap: ‑    Deleted base: ‑